Please use this identifier to cite or link to this item: https://doi.org/10.1371/journal.pone.0184372
Title: Validation of the 18-gene classifier as a prognostic biomarker of distant metastasis in breast cancer
Authors: Cheng, S.H.-C
Huang, T.-T
Cheng, Y.-H.
Tan, T.B.K. 
Horng, C.-F.
Wang, Y.A.
Brian, N.S.
Shih, L.-S.
Yu, B.-L.
Keywords: chemokine receptor CCR1
matrix metalloproteinase 15
protein kinase Pim 1
transcription factor 7 like 1
vanilloid receptor 6
tumor marker
adult
Article
BLM gene
breast cancer
breast surgery
BUB1B gene
C16ORF7 gene
cancer prognosis
cancer staging
CCNB1 gene
CCR1 gene
classifier
DDX39 gene
distant metastasis
DTX2 gene
ENSA gene
external validity
gene
gene classifier
genetic algorithm
high risk patient
human
human tissue
internal validity
low risk patient
major clinical study
MMP15 gene
NFATC2IP gene
OBSL1 gene
PIM1 gene
probability
PTI1 gene
RCHY1 gene
risk assessment
scoring system
STIL gene
TCF3 gene
TPX2 gene
TRPV6 gene
aged
Breast Neoplasms
cancer grading
female
gene expression profiling
genetics
metastasis
middle aged
mortality
multimodality cancer therapy
pathology
prognosis
proportional hazards model
reproducibility
young adult
Adult
Aged
Biomarkers, Tumor
Breast Neoplasms
Combined Modality Therapy
Female
Gene Expression Profiling
Humans
Middle Aged
Neoplasm Grading
Neoplasm Metastasis
Neoplasm Staging
Prognosis
Proportional Hazards Models
Reproducibility of Results
Young Adult
Issue Date: 2017
Publisher: Public Library of Science
Citation: Cheng, S.H.-C, Huang, T.-T, Cheng, Y.-H., Tan, T.B.K., Horng, C.-F., Wang, Y.A., Brian, N.S., Shih, L.-S., Yu, B.-L. (2017). Validation of the 18-gene classifier as a prognostic biomarker of distant metastasis in breast cancer. PLoS ONE 12 (9) : e0184372. ScholarBank@NUS Repository. https://doi.org/10.1371/journal.pone.0184372
Abstract: We validated an 18-gene classifier (GC) initially developed to predict local/regional recurrence after mastectomy in estimating distant metastasis risk. The 18-gene scoring algorithm defines scores as: <21, low risk; ?21, high risk. Six hundred eighty-three patients with primary operable breast cancer and fresh frozen tumor tissues available were included. The primary outcome was the 5-year probability of freedom from distant metastasis (DMFP). Two external datasets were used to test the predictive accuracy of 18-GC. The 5-year rates of DMFP for patients classified as low-risk (n = 146, 21.7%) and high-risk (n = 537, 78.6%) were 96.2% (95% CI, 91.1%–98.8%) and 80.9% (74.6%–81.9%), respectively (median follow-up interval, 71.8 months). The 5-year rates of DMFP of the low-risk group in stage I (n = 62, 35.6%), stage II (n = 66, 20.1%), and stage III (n = 18, 10.3%) were 100%, 94.2% (78.5%–98.5%), and 90.9% (50.8%–98.7%), respectively. Multivariate analysis revealed that 18-GC is an independent prognostic factor of distant metastasis (adjusted hazard ratio, 5.1; 95% CI, 1.8–14.1; p = 0.0017) for scores of ?21. External validation showed that the 5-year rate of DMFP in the low- and high-risk patients was 94.1% (82.9%–100%) and 80.3% (70.7%–89.9%, p = 0.06) in a Singapore dataset, and 89.5% (81.9%–94.1%) and 73.6% (67.2%–79.0%, p = 0.0039) in the GEO-GSE20685 dataset, respectively. In conclusion, 18-GC is a viable prognostic biomarker for breast cancer to estimate distant metastasis risk. © 2017 Cheng et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Source Title: PLoS ONE
URI: https://scholarbank.nus.edu.sg/handle/10635/165779
ISSN: 1932-6203
DOI: 10.1371/journal.pone.0184372
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