Pathway-based association analyses identified TRAIL pathway for osteoporotic fractures
Zhang Y.-P. Liu Y.-Z. Guo Y. Liu X.-G. Xu X.-H. Guo Y.-F. Chen Y. Zhang F. Pan F. Zhu X.-Z.
Zhang Y.-P.
Liu Y.-Z.
Guo Y.
Xu X.-H.
Guo Y.-F.
Chen Y.
Zhang F.
Pan F.
Zhu X.-Z.
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Alternative Title
Abstract
Introduction: Hip OF carries the highest morbidity and mortality. Previous studies revealed that individual genes/loci in the Tumor Necrosis Factor (TNF) -Related Apoptosis-Inducing Ligand (TRAIL) pathway were associated with bone metabolism. This study aims to verify the potential association between hip OF and TRAIL pathway. Methods: Using genome-wide genotype data from Affymetrix 500 K SNP arrays, we performed novel pathway-based association analyses for hip OF in 700 elderly Chinese Han subjects (350 with hip OF and 350 healthy matched controls). Results: The TRAIL pathway achieved a significant p value (p = 0.01) for association with hip OF. Among the 38 genes in the TRAIL pathway, seven genes achieved nominally significant association with hip OF (p<0.05); the TNFSF10 (TRAIL) gene obtained the most significant p value (p = 1.70×10 -4 ). SNPs (rs719126, rs6533015, rs9594738, rs1805034, rs11160706) from five genes (CFLAR, NFKB1, TNFSF11, TNFRSF11A, TRAF3) of the pathway had minor alleles that appear to be protective to hip OF. SNPs (rs6445063 and rs4259415) from two genes (TNFSF10 and TNFRSF10B) of the pathway had minor alleles (A) that are associated with an increased risk of hip OF, with the ORs (odds ratios) of 16.51 (95%CI:3.83-71.24) and 1.37 (95%CI:1.08-1.74), respectively. Conclusions: Our study supports the potential role of the TRAIL pathway in the pathogenesis of hip OF in Chinese Han population. Further functional study of this pathway will be pursued to determine the mechanism by which it confers risk to hip OF. © 2011 Zhang et al.
Keywords
adult, article, CFLAR gene, Chinese, controlled study, female, fragility fracture, gene, gene frequency, gene function, genetic association, genetic risk, genome analysis, hip fracture, human, major clinical study, molecular pathology, NFKB1 gene, single nucleotide polymorphism, TNFRSF10B gene, TNFRSF11A gene, TNFSF10 gene, TNFSF11 gene, TRAF3 gene, TRAIL gene, aged, fragility fracture, genetic predisposition, genetics, male, signal transduction, tumor necrosis factor related apoptosis inducing ligand, Aged, Female, Genetic Predisposition to Disease, Humans, Male, Osteoporotic Fractures, Polymorphism, Single Nucleotide, Signal Transduction, TNF-Related Apoptosis-Inducing Ligand
Source Title
PLoS ONE
Publisher
Series/Report No.
Collections
Rights
Attribution 4.0 International
Date
2011
DOI
10.1371/journal.pone.0021835
Type
Article