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https://doi.org/10.1371/journal.pgen.1000054
| Title: | Heterogeneity of breast cancer associations with five susceptibility loci by clinical and pathological characteristics | Authors: | Garcia-Closas M. Hall P. Nevanlinna H. Pooley K. Morrison J. Richesson D.A. Bojesen S.E. Nordestgaard B.G. Axelsson C.K. Arias J.I. Milne R.L. Ribas G. González-Neira A. Benítez J. Zamora P. Brauch H. Justenhoven C. Hamann U. Ko Y.-D. Bruening T. Haas S. Dörk T. Schürmann P. Hillemanns P. Bogdanova N. Bremer M. Karstens J.H. Fagerholm R. Aaltonen K. Aittomäki K. Von Smitten K. Blomqvist C. Mannermaa A. Uusitupa M. Eskelinen M. Tengström M. Kosma V.-M. Kataja V. Chenevix-Trench G. Spurdle A.B. Beesley J. Chen X. Devilee P. Van Asperen C.J. Jacobi C.E. Tollenaar R.A.E.M. Huijts P.E.A. Klijn J.G.M. Chang-Claude J. Kropp S. Slanger T. Flesch-Janys D. Mutschelknauss E. Salazar R. Wang-Gohrke S. Couch F. Goode E.L. Olson J.E. Vachon C. Fredericksen Z.S. Giles G.G. Baglietto L. Severi G. Hopper J.L. English D.R. Southey M.C. Haiman C.A. Henderson B.E. Kolonel L.N. Le Marchand L. Stram D.O. Hunter D.J. Hankinson S.E. Cox D.G. Tamimi R. Kraft P. Sherman M.E. Chanock S.J. Lissowska J. Brinton L.A. Peplonska B. Hooning M.J. Meijers-Heijboer H. Collee J.M. Van Den Ouweland A. Uitterlinden A.G. Liu J. Low Y.L. Yuqing L. Humphreys K. Czene K. Cox A. Balasubramanian S.P. Cross S.S. Reed M.W.R. Blows F. Driver K. Dunning A. Tyrer J. Ponder B.A.J. Sangrajrang S. Brennan P. McKay J. Odefrey F. Gabrieau V. Sigurdson A. Doody M. Struewing J.P. Alexander B. Easton D.F. Pharoah P.D. |
Keywords: | estrogen receptor fibroblast growth factor receptor 2 progesterone receptor actin binding protein FGFR2 protein, human fibroblast growth factor receptor 2 LSP1 protein, human MAP3K1 protein, human mitogen activated protein kinase kinase kinase 1 progesterone receptor TNRC9 protein, human allele article Asian breast cancer breast carcinogenesis cancer genetics cancer invasion cancer risk cancer survival cancer susceptibility chromosome 8q clinical feature controlled study Europe female gene locus genetic association genetic heterogeneity genetic susceptibility genetic variability human major clinical study overall survival pathology prognosis single nucleotide polymorphism breast tumor case control study chromosome 8 gene linkage disequilibrium genetic predisposition genetics middle aged risk single nucleotide polymorphism trinucleotide repeat Breast Neoplasms Case-Control Studies Chromosomes, Human, Pair 8 Female Genetic Predisposition to Disease Humans Linkage Disequilibrium MAP Kinase Kinase Kinase 1 Microfilament Proteins Middle Aged Odds Ratio Polymorphism, Single Nucleotide Receptor, Fibroblast Growth Factor, Type 2 Receptors, Progesterone Trinucleotide Repeats |
Issue Date: | 2008 | Citation: | Garcia-Closas M., Hall P., Nevanlinna H., Pooley K., Morrison J., Richesson D.A., Bojesen S.E., Nordestgaard B.G., Axelsson C.K., Arias J.I., Milne R.L., Ribas G., González-Neira A., Benítez J., Zamora P., Brauch H., Justenhoven C., Hamann U., Ko Y.-D., Bruening T., Haas S., Dörk T., Schürmann P., Hillemanns P., Bogdanova N., Bremer M., Karstens J.H., Fagerholm R., Aaltonen K., Aittomäki K., Von Smitten K., Blomqvist C., Mannermaa A., Uusitupa M., Eskelinen M., Tengström M., Kosma V.-M., Kataja V., Chenevix-Trench G., Spurdle A.B., Beesley J., Chen X., Devilee P., Van Asperen C.J., Jacobi C.E., Tollenaar R.A.E.M., Huijts P.E.A., Klijn J.G.M., Chang-Claude J., Kropp S., Slanger T., Flesch-Janys D., Mutschelknauss E., Salazar R., Wang-Gohrke S., Couch F., Goode E.L., Olson J.E., Vachon C., Fredericksen Z.S., Giles G.G., Baglietto L., Severi G., Hopper J.L., English D.R., Southey M.C., Haiman C.A., Henderson B.E., Kolonel L.N., Le Marchand L., Stram D.O., Hunter D.J., Hankinson S.E., Cox D.G., Tamimi R., Kraft P., Sherman M.E., Chanock S.J., Lissowska J., Brinton L.A., Peplonska B., Hooning M.J., Meijers-Heijboer H., Collee J.M., Van Den Ouweland A., Uitterlinden A.G., Liu J., Low Y.L., Yuqing L., Humphreys K., Czene K., Cox A., Balasubramanian S.P., Cross S.S., Reed M.W.R., Blows F., Driver K., Dunning A., Tyrer J., Ponder B.A.J., Sangrajrang S., Brennan P., McKay J., Odefrey F., Gabrieau V., Sigurdson A., Doody M., Struewing J.P., Alexander B., Easton D.F., Pharoah P.D. (2008). Heterogeneity of breast cancer associations with five susceptibility loci by clinical and pathological characteristics. PLoS Genetics 4 (4) : e1000054. ScholarBank@NUS Repository. https://doi.org/10.1371/journal.pgen.1000054 | Abstract: | A three-stage genome-wide association study recently identified single nucleotide polymorphisms (SNPs) in five loci (fibroblast growth receptor 2 (FGFR2), trinucleotide repeat containing 9 (TNRC9), mitogen-activated protein kinase 3 K1 (MAP3K1), 8q24, and lymphocyte-specific protein 1 (LSP1)) associated with breast cancer risk. We investigated whether the associations between these SNPs and breast cancer risk varied by clinically important tumor characteristics in up to 23,039 invasive breast cancer cases and 26,273 controls from 20 studies. We also evaluated their influence on overall survival in 13,527 cases from 13 studies. All participants were of European or Asian origin. rs2981582 in FGFR2 was more strongly related to ER-positive (per-allele OR (95%CI) = 1.31 (1.27-1.36)) than ER-negative (1.08 (1.03-1.14)) disease (P for heterogeneity = 10-13). This SNP was also more strongly related to PR-positive, low grade and node positive tumors (P = 10-5, 10 -8, 0.013, respectively). The association for rs13281615 in 8q24 was stronger for ER-positive, PR-positive, and low grade tumors (P = 0.001, 0.011 and 10-4, respectively). The differences in the associations between SNPs in FGFR2 and 8q24 and risk by ER and grade remained significant after permutation adjustment for multiple comparisons and after adjustment for other tumor characteristics. Three SNPs (rs2981582, rs3803662, and rs889312) showed weak but significant associations with ER-negative disease, the strongest association being for rs3803662 in TNRC9 (1.14 (1.09-1.21)). rs13281615 in 8q24 was associated with an improvement in survival after diagnosis (per-allele HR = 0.90 (0.83-0.97). The association was attenuated and non-significant after adjusting for known prognostic factors. Our findings show that common genetic variants influence the pathological subtype of breast cancer and provide further support for the hypothesis that ER-positive and ER-negative disease are biologically distinct. Understanding the etiologic heterogeneity of breast cancer may ultimately result in improvements in prevention, early detection, and treatment. | Source Title: | PLoS Genetics | URI: | https://scholarbank.nus.edu.sg/handle/10635/161687 | ISSN: | 15537390 | DOI: | 10.1371/journal.pgen.1000054 |
| Appears in Collections: | Elements Staff Publications |
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