Please use this identifier to cite or link to this item: https://doi.org/10.1016/j.syapm.2021.126223
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dc.titleProposal of Carbonactinosporaceae fam. nov. within the class Actinomycetia. Reclassification of Streptomyces thermoautotrophicus as Carbonactinospora thermoautotrophica gen. nov., comb. nov
dc.contributor.authorVolpiano, Camila Gazolla
dc.contributor.authorSant'Anna, Fernando Hayashi
dc.contributor.authorda Mota, Fabio Faria
dc.contributor.authorSangal, Vartul
dc.contributor.authorSutcliffe, Iain
dc.contributor.authorMunusamy, Madhaiyan
dc.contributor.authorSaravanan, Venkatakrishnan Sivaraj
dc.contributor.authorSee-Too, Wah-Seng
dc.contributor.authorPereira Passaglia, Luciane Maria
dc.contributor.authorRosado, Alexandre Soares
dc.date.accessioned2022-10-11T08:08:41Z
dc.date.available2022-10-11T08:08:41Z
dc.date.issued2021-07-01
dc.identifier.citationVolpiano, Camila Gazolla, Sant'Anna, Fernando Hayashi, da Mota, Fabio Faria, Sangal, Vartul, Sutcliffe, Iain, Munusamy, Madhaiyan, Saravanan, Venkatakrishnan Sivaraj, See-Too, Wah-Seng, Pereira Passaglia, Luciane Maria, Rosado, Alexandre Soares (2021-07-01). Proposal of Carbonactinosporaceae fam. nov. within the class Actinomycetia. Reclassification of Streptomyces thermoautotrophicus as Carbonactinospora thermoautotrophica gen. nov., comb. nov. Systematic and Applied Microbiology 44 (4) : 126223. ScholarBank@NUS Repository. https://doi.org/10.1016/j.syapm.2021.126223
dc.identifier.issn0723-2020
dc.identifier.urihttps://scholarbank.nus.edu.sg/handle/10635/232222
dc.description.abstractStreptomyces thermoautotrophicus UBT1T has been suggested to merit generic status due to its phylogenetic placement and distinctive phenotypes among Actinomycetia. To evaluate whether ‘S. thermoautotrophicus’ represents a higher taxonomic rank, ‘S. thermoautotrophicus’ strains UBT1T and H1 were compared to Actinomycetia using 16S rRNA gene sequences and comparative genome analyses. The UBT1T and H1 genomes each contain at least two different 16S rRNA sequences, which are closely related to those of Acidothermus cellulolyticus (order Acidothermales). In multigene-based phylogenomic trees, UBT1T and H1 typically formed a sister group to the Streptosporangiales-Acidothermales clade. The Average Amino Acid Identity, Percentage of Conserved Proteins, and whole-genome Average Nucleotide Identity (Alignment Fraction) values were ≤58.5%, ≤48%, ≤75.5% (0.3) between ‘S. thermoautotrophicus’ and Streptosporangiales members, all below the respective thresholds for delineating genera. The values for genomics comparisons between strains UBT1T and H1 with Acidothermales, as well as members of the genus Streptomyces, were even lower. A review of the ‘S. thermoautotrophicus’ proteomic profiles and KEGG orthology demonstrated that UBT1T and H1 present pronounced differences, both tested and predicted, in phenotypic and chemotaxonomic characteristics compared to its sister clades and Streptomyces. The distinct phylogenetic position and the combination of genotypic and phenotypic characteristics justify the proposal of Carbonactinospora gen. nov., with the type species Carbonactinospora thermoautotrophica comb. nov. (type strain UBT1T, = DSM 100163T = KCTC 49540T) belonging to Carbonactinosporaceae fam. nov. within Actinomycetia. © 2021 The Author(s)
dc.publisherElsevier GmbH
dc.rightsAttribution 4.0 International
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.sourceScopus OA2021
dc.subjectActinobacteria
dc.subjectChemoautotrophic bacteria
dc.subjectGenomics metrics
dc.subjectPhylogenetic systematics
dc.typeArticle
dc.contributor.departmentTEMASEK LABORATORIES
dc.description.doi10.1016/j.syapm.2021.126223
dc.description.sourcetitleSystematic and Applied Microbiology
dc.description.volume44
dc.description.issue4
dc.description.page126223
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