Please use this identifier to cite or link to this item: https://doi.org/10.25540/XT13-8VRZ
DC FieldValue
dc.titleSurface curvature and basal hydraulic stress induce spatial bias in cell extrusion
dc.contributor.authorCHENG-KUANG HUANG
dc.contributor.authorYONG XIANBIN
dc.contributor.authorTAI WAI DAVID SHE
dc.contributor.authorCHWEE TECK LIM
dc.coverage.spatialSingapore
dc.date.accessioned2022-04-25T04:07:06Z
dc.date.available2022-04-25
dc.date.issued2022-04-25
dc.identifier.citationCHENG-KUANG HUANG, YONG XIANBIN, TAI WAI DAVID SHE, CHWEE TECK LIM (2022-04-25). Surface curvature and basal hydraulic stress induce spatial bias in cell extrusion. ScholarBank@NUS Repository. [Dataset]. <a href="https://doi.org/10.25540/XT13-8VRZ" target="_blank">https://doi.org/10.25540/XT13-8VRZ</a>
dc.identifier.urihttps://scholarbank.nus.edu.sg/handle/10635/224176
dc.identifier.urihttps://doi.org/10.25540/XT13-8VRZ
dc.description.abstract<p>Reflection interference contrast analysis; pFAK/FAK analysis; and osmolarity calculations</p>
dc.rightsAttribution-NonCommercial 4.0 International
dc.rights.urihttp://creativecommons.org/licenses/by-nc/4.0/
dc.subjectBiophysics, Cell biology, Bioengineering, Biomaterials
dc.typeDataset
dc.contributor.departmentMECHANOBIOLOGY INSTITUTE
dc.description.doidoi:10.25540/XT13-8VRZ
dc.grant.idRGP0038/2018
dc.grant.fundingagencyHuman Frontier Science Program
dc.type.dataset.7z
dc.type.dataset.xlsx
dc.type.dataset.7z
dc.type.dataset.7z
dc.type.dataset.xlsx
dc.type.dataset.zip
dc.type.dataset.zip
dc.type.dataset.zip
dc.type.dataset.zip
dc.type.dataset.zip
dc.type.dataset.docx
dc.description.contactprofilembihc@nus.edu.sg
dc.description.contactprofileyong.xianbin@u.nus.edu
dc.description.contactprofiledavid.she@nus.edu.sg
dc.description.contactprofilectlim@nus.edu.sg
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File Description SizeFormatAccess Settings 
histogramHillValley.7zR code and processed image data for RICM of curved surfaces980.27 kBUnknown

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osmolarityCalcu.xlsxcalculation of media osmolarity14.54 kBMicrosoft Excel XML

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Processed FAK data.7zR code and processed image data for pFAK FAK immunocytochemistry over curved surfaces110.36 MBUnknown

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histogramTime.7zR code and processed image data for RICM of hyper- to iso-Osmotic treatment over time397.65 MBUnknown

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substrateDimensions.xlsxWave substrate dimension characterization19.36 kBMicrosoft Excel XML

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3DTFM.zipCodes used to estimate the 3D forces exerted by the cells via a finite element method3.86 MBZIP

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3DTFM_analysis.zipCodes used to analysis the 3D forces exerted by the cells on the cylindrical wave substrates. Also contains the data showing the processed forces at each node1.65 MBZIP

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Extrusions.zipCodes used to calculate the normalized extrusion rate from the detected extrusion events. Also contains the data for the normalized extrusion rates as well as the extrusion counts for each condition965.49 kBZIP

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opticalflow3D.zipSource code for 3D Farneback algorithm that was used to obtain the displacement between the two bead image volumes115.69 kBZIP

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Unet-extrusion-detection.zipSource code for the deeply supervised attention-gated residual U-net that was trained to detect extrusion events1.3 MBZIP

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westernBlotMaterialsand Analysis.docxAntibodies, devices, and software used in FAK and Akt immunoblotting, and the statistical analysis of the blots18.92 kBMicrosoft Word XML

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This item is licensed under a Creative Commons License Creative Commons