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Niranjan Nagarajan

rp21692

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Full Name
Niranjan Nagarajan
Main Affiliation
 
Faculty
 
Email
dcsnn@nus.edu.sg
 

Publications

Results 1-20 of 27 (Search time: 0.013 seconds).

Issue DateTitleAuthor(s)
12019An expectation-maximization algorithm enables accurate ecological modeling using longitudinal microbiome sequencing dataLi, C.; Chng, K.R.; Kwah, J.S.; Av-Shalom, T.V.; Tucker-Kellogg, L.; Nagarajan, N. 
22014BAsE-Seq: a method for obtaining long viral haplotypes from short sequence readsHong, L.Z.; Hong, S.; Wong, H.T.; Aw, P.P.; Cheng, Y.; Wilm, A.; de Sessions, P.F.; Lim, S.G. ; Nagarajan, N. ; Hibberd, M.L. ; Quake, S.R.; Burkholder, W.F.
38-Sep-2021BEEM-Static: Accurate inference of ecological interactions from cross-sectional microbiome dataLi, Chenhao A.; Av-Shalom, Tamar; Tan, Jun Wei Gerald A.; Kwah, Junmei Samantha; Chng, Kern Rei A.; Nagarajan, Niranjan 
42019Boosting natural history research via metagenomic clean-up of crowdsourced fecesSrivathsan, A. ; Nagarajan, N. ; Meier, R. 
514-Dec-2021CalmBelt: Rapid SARS-CoV-2 Genome Characterization for Outbreak TrackingYingtaweesittikul, Hatairat; Ko, Karrie ; Abdul Rahman, Nurdyana ; Tan, Shireen Yan Ling ; Nagarajan, Niranjan ; Suphavilai, Chayaporn
61-Apr-2021COVID-19 drug practices risk antimicrobial resistance evolutionAfshinnekoo, Ebrahim; Bhattacharya, Chandrima; Burguete-García, A.; Castro-Nallar, Eduardo; Deng, Youping; Desnues, Christelle; Dias-Neto, Emmanuel; Elhaik, Eran; Iraola, Gregorio; Jang, Soojin; Łabaj, P.P.; Mason, Christopher E.; Nagarajan, Niranjan ; Poulsen, Michael; Prithiviraj, Bharath; Siam, Rania; Shi, Tieliu; Suzuki, Haruo; Werner, Johannes; Mercedes Zambrano, Maria; Bhattacharyya, Malay; MetaSUB Consortium.
72017Development of a genetically programed vanillin-sensing bacterium for high-throughput screening of lignin-degrading enzyme librariesSana, B; Chia, K.H.B; Raghavan, S.S; Ramalingam, B; Nagarajan, N ; Seayad, J; Ghadessy, F.J
81-Aug-2022Dominant CarbapenemaseEncoding Plasmids in Clinical Enterobacterales Isolates and Hypervirulent Klebsiella pneumoniae, SingaporeYong, Melvin; Chen, Yahua ; Oo, Guodong ; Chang, Kai Chirng; Chu, Wilson HW ; Teo, Jeanette; Venkatachalam, Indumathi ; Thevasagayam, Natascha May ; Sridatta, Prakki S Rama ; Koh, Vanessa; Marcoleta, Andres E; Chen, Hanrong; Nagarajan, Niranjan ; Kalisvar, Marimuthu ; Ng, Oon Tek ; Gan, Yunn-Hwen 
92014Draft genome sequence of polychlorinated biphenyl-dechlorinating Dehalococcoides mccartyi strain SG1, which carries a circular putative plasmidWang S. ; Chng K.R. ; Wu C. ; Wilm A.; Nagarajan N. ; He J. 
1025-Feb-2021Ectopic gut colonization: a metagenomic study of the oral and gut microbiome in Crohn's diseaseHu, Shijia ; Png, Eileen; Gowans, Michelle ; Ong, David EH ; de Sessions, Paola Florez; Song, Jie; Nagarajan, Niranjan 
112016Fast and sensitive mapping of nanopore sequencing reads with GraphMapSovi?, I; Šiki?, M; Wilm, A; Fenlon, S.N; Chen, S ; Nagarajan, N 
122013Genome sequencing of four strains of Rickettsia prowazekii, the causative agent of epidemic typhus, including one flying squirrel isolateBishop-Lilly, K.A; Ge, H; Butani, A; Osborne, B; Verratti, K; Mokashi, V; Nagarajan, N ; Pop, M; Read, T.D; Richards, A.L
1313-Oct-2022Genome-centric analysis of short and long read metagenomes reveals uncharacterized microbiome diversity in Southeast AsiansGounot, Jean-Sebastien; Chia, Minghao; Bertrand, Denis; Saw, Woei-Yuh ; Ravikrishnan, Aarthi; Low, Adrian ; Ding, Yichen; Amanda, Ng Hui Qi; Tan, Linda Wei Lin ; Teo, Yik-Ying ; Seedorf, Henning ; Nagarajan, Niranjan 
142020Gut microbiota changes in children with autism spectrum disorder: A systematic reviewHo L.K.H.; Tong V.J.W.; Syn N.; Nagarajan N. ; Tham E.H. ; Tay S.K. ; Shorey S. ; Tambyah P.A. ; Law E.C.N. 
151-Oct-2022Long-term ecological and evolutionary dynamics in the gut microbiomes of carbapenemase-producing Enterobacteriaceae colonized subjectsKang, JTL; Teo, JJY; Bertrand, D; Ng, A; Ravikrishnan, A; Yong, M; Ng, OT ; Marimuthu, K ; Chen, SL ; Chng, KR ; Gan, YH ; Nagarajan, N 
161-Sep-2020Metagenome-wide association analysis identifies microbial determinants of post-antibiotic ecological recovery in the gutChng, KR; Ghosh, TS; Tan, YH ; Nandi, T; Lee, IR ; Ng, AHQ; Li, C; Ravikrishnan, A; Lim, KM; Lye, D ; Barkham, T ; Raman, K; Chen, SL ; Chai, L ; Young, B; Gan, YH ; Nagarajan, N 
171-Aug-2022Mutual Exclusion of <i>Methanobrevibacter</i> Species in the Human Gut Microbiota Facilitates Directed Cultivation of a <i>Candidatus</i> Methanobrevibacter Intestini RepresentativeLow, Adrian ; Lee, Jolie Kar Yi; Gounot, Jean-Sebastien; Ravikrishnan, Aarthi; Ding, Yichen; Saw, Woei-Yuh ; Tan, Linda Wei Lin ; Moong, Don Kyin Nwe; Teo, Yik Ying ; Nagarajan, Niranjan ; Seedorf, Henning 
182016OPERA-LG: Efficient and exact scaffolding of large, repeat-rich eukaryotic genomes with performance guaranteesGao, S; Bertrand, D; Chia, B.K.H; Nagarajan, N 
191-Dec-2021Predicting heterogeneity in clone-specific therapeutic vulnerabilities using single-cell transcriptomic signaturesSuphavilai, Chayaporn; Chia, Shumei; Sharma, Ankur; Tu, Lorna; Da Silva, Rafael Peres; Mongia, Aanchal; DasGupta, Ramanuj; Nagarajan, Niranjan 
201-Jan-2023Profiling Microbial Communities in Idiopathic Granulomatous MastitisOng, Seeu Si; Xu, Jia; Sim, Choon Kiat; Khng, Alexis Jiaying; Ho, Peh Joo ; Kwan, Philip Kam Weng ; Ravikrishnan, Aarthi; Tan, Kiat-Tee Benita ; Tan, Qing Ting ; Tan, Ern Yu; Tan, Su-Ming ; Putti, Thomas Choudary ; Lim, Swee Ho ; Tang, Ee Ling Serene; Nagarajan, Niranjan ; Karnani, Neerja ; Li, Jingmei ; Hartman, Mikael