Browsing by Author Wei, C.-L.

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Showing results 7 to 23 of 23 < previous 
Issue DateTitleAuthor(s)
May-2011Comprehensive long-span paired-end-tag mapping reveals characteristic patterns of structural variations in epithelial cancer genomesHillmer, A.M.; Yao, F.; Inaki, K.; Lee, W.H.; Ariyaratne, P.N.; Teo, A.S.M.; Woo, X.Y.; Zhang, Z.; Zhao, H.; Ukil, L.; Chen, J.P.; Zhu, F.; So, J.B.Y.; Salto-Tellez, M. ; Poh, W.T.; Zawack, K.F.B.; Nagarajan, N.; Gao, S.; Li, G.; Kumar, V.; Lim, H.P.J.; Sia, Y.Y.; Chan, C.S.; Leong, S.T.; Neo, S.C.; Choi, P.S.D.; Thoreau, H.; Tan, P.B.O. ; Shahab, A.; Ruan, X.; Bergh, J.; Hall, P.; Cacheux-Rataboul, V.; Wei, C.-L.; Yeoh, K.G.; Sung, W.-K.; Bourque, G.; Liu, E.T.; Ruan, Y. 
2011CTCF-mediated functional chromatin interactome in pluripotent cellsHandoko, L.; Xu, H.; Li, G.; Ngan, C.Y.; Chew, E.; Schnapp, M.; Lee, C.W.H.; Ye, C.; Ping, J.L.H.; Mulawadi, F.; Wong, E.; Sheng, J.; Zhang, Y.; Poh, T.; Chan, C.S.; Kunarso, G.; Shahab, A.; Bourque, G.; Cacheux-Rataboul, V.; Sung, W.-K. ; Ruan, Y.; Wei, C.-L.
2010Dynamic changes in the human methylome during differentiationLaurent, L.; Wong, E.; Li, G.; Huynh, T.; Tsirigos, A.; Ong, C.T.; Low, H.M.; Sung, K.W.K. ; Rigoutsos, I.; Loring, J.; Wei, C.-L.
2012Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulationLi, G.; Ruan, X.; Auerbach, R.K.; Sandhu, K.S.; Zheng, M.; Wang, P.; Poh, H.M.; Goh, Y.; Lim, J.; Zhang, J.; Sim, H.S.; Peh, S.Q.; Mulawadi, F.H.; Ong, C.T.; Orlov, Y.L.; Hong, S.; Zhang, Z.; Landt, S.; Raha, D.; Euskirchen, G.; Wei, C.-L.; Ge, W.; Wang, H.; Davis, C.; Fisher-Aylor, K.I.; Mortazavi, A.; Gerstein, M.; Gingeras, T.; Wold, B.; Sun, Y.; Fullwood, M.J.; Cheung, E.; Liu, E.; Sung, W.-K. ; Snyder, M.; Ruan, Y.
2007Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs)Ruan, Y.; Hong, S.O.; Siew, W.C.; Kuo, P.C.; Xiao, D.Z.; Srinivasan, K.G.; Yao, F.; Chiou, Y.C.; Liu, J.; Ariyaratne, P.; Bin, W.G.W.; Kuznetsov, V.A.; Shahab, A.; Sung, W.-K. ; Bourque, G.; Palanisamy, N.; Wei, C.-L.
17-Aug-2007Genome-wide Mapping of RELA(p65) Binding Identifies E2F1 as a Transcriptional Activator Recruited by NF-κB upon TLR4 ActivationLim, C.-A.; Yao, F.; Wong, J.J.-Y.; George, J.; Xu, H.; Chiu, K.P.; Sung, W.-K. ; Lipovich, L.; Vega, V.B.; Chen, J.; Shahab, A.; Zhao, X.D.; Hibberd, M.; Wei, C.-L.; Lim, B.; Ng, H.-H. ; Ruan, Y.; Chin, K.-C.
13-Jun-2008Integration of External Signaling Pathways with the Core Transcriptional Network in Embryonic Stem CellsChen, X.; Xu, H.; Yuan, P.; Fang, F.; Huss, M.; Vega, V.B.; Wong, E.; Orlov, Y.L.; Zhang, W.; Jiang, J.; Loh, Y.-H.; Yeo, H.C.; Yeo, Z.X.; Narang, V.; Govindarajan, K.R.; Leong, B.; Shahab, A.; Ruan, Y.; Bourque, G.; Sung, W.-K.; Clarke, N.D.; Wei, C.-L.; Ng, H.-H. 
2009Jmjd3 contributes to the control of gene expression in LPS-activated macrophagesDe Santa, F.; Narang, V.; Yap, Z.H.; Tusi, B.K.; Burgold, T.; Austenaa, L.; Bucci, G.; Caganova, M.; Notarbartolo, S.; Casola, S.; Testa, G.; Sung, W.-K. ; Wei, C.-L.; Natoli, G.
28-Sep-2012Long Span DNA Paired-End-Tag (DNA-PET) Sequencing Strategy for the Interrogation of Genomic Structural Mutations and Fusion-Point-Guided Reconstruction of AmpliconsYao, F.; Ariyaratne, P.N.; Hillmer, A.M.; Lee, W.H.; Li, G.; Teo, A.S.M.; Woo, X.Y.; Zhang, Z.; Chen, J.P.; Poh, W.T.; Zawack, K.F.B.; Chan, C.S.; Leong, S.T.; Neo, S.C.; Choi, P.S.D.; Gao, S.; Nagarajan, N.; Thoreau, H.; Shahab, A.; Ruan, X.; Cacheux-Rataboul, V.; Wei, C.-L.; Bourque, G.; Sung, W.-K.; Liu, E.T.; Ruan, Y. 
Apr-2009Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analysesFullwood, M.J.; Wei, C.-L.; Liu, E.T.; Ruan, Y. 
2007Overexpression of interleukin-13 induces minimal-change-like nephropathy in ratsLai, K.-W.; Wei, C.-L.; Tan, L.-K.; Yap, H.-K. ; Lee, C.G.L.; Tan, P.-H.; Chiang, G.S.C.; Jordan, S.C.
2007Pathway aberrations of murine melanoma cells observed in Paired-End diTag transcriptomesChiu, K.P.; Ariyaratne, P.; Xu, H.; Tan, A.; Ng, P.; Liu, E.T.-B.; Ruan, Y.; Wei, C.-L.; Sung, W.-K.K. 
2006PET-tool: A software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence dataChiu, K.P.; Wong, C.-H.; Chen, Q. ; Ariyaratne, P.; Ooi, H.S.; Wei, C.-L.; Sung, W.-K.K. ; Ruan, Y.
6-Nov-2008Sall4 Regulates Distinct Transcription Circuitries in Different Blastocyst-Derived Stem Cell LineagesLim, C.Y.; Tam, W.-L.; Zhang, J.; Ang, H.S.; Jia, H.; Lipovich, L.; Ng, H.-H. ; Wei, C.-L.; Sung, W.K.; Robson, P.; Yang, H.; Lim, B.
Apr-2006The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cellsLoh, Y.-H.; Wu, Q.; Chew, J.-L.; Vega, V.B.; Zhang, W.; Chen, X.; Bourque, G.; George, J.; Leong, B.; Liu, J.; Wong, K.-Y.; Sung, K.W.; Lee, C.W.H.; Zhao, X.-D.; Chiu, K.-P.; Lipovich, L.; Kuznetsov, V.A.; Robson, P.; Stanton, L.W.; Wei, C.-L.; Ruan, Y.; Lim, B.; Ng, H.-H. 
Jun-2007Whole-genome cartography of estrogen receptor α binding sitesLin, C.-Y.; Vega, V.B.; Thomsen, J.S.; Zhang, T.; Say, L.K.; Xie, M.; Kuo, P.C.; Lipovich, L.; Barnett, D.H.; Stossi, F.; Yeo, A.; George, J.; Kuznetsov, V.A.; Yew, K.L.; Tze, H.C.; Palanisamy, N.; Miller, L.D.; Cheung, E. ; Katzenellenbogen, B.S.; Ruan, Y.; Bourque, G.; Wei, C.-L.; Liu, E.T.
2007Whole-Genome Mapping of Histone H3 Lys4 and 27 Trimethylations Reveals Distinct Genomic Compartments in Human Embryonic Stem CellsZhao, X.D.; Han, X.; Chew, J.L.; Liu, J.; Chiu, K.P.; Choo, A.; Orlov, Y.L.; Sung, W.-K. ; Shahab, A.; Kuznetsov, V.A.; Bourque, G.; Oh, S.; Ruan, Y.; Ng, H.-H. ; Wei, C.-L.