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Issue Date	Title	Author(s)
1-Nov-2013	3D chromosome modeling with semi-definite programming and Hi-C data	Zhang, Z.; Li, G.; Toh, K.-C. ; Sung, W.-K.
2005	A better gap penalty for Pairwise SVM	Chua, H.N.; Sung, W.-K.
2006	A correlated motif approach for finding short linear motifs from protein interaction networks	Tan, S.-H.; Hugo, W. ; Sung, W.-K. ; Ng, S.-K.
2004	A faster and more space-efficient algorithm for inferring Arc-annotations of RNA sequences through alignment	Jansson, J. ; Ng, S.-K.; Sung, W.-K. ; Willy, H.
2006	A faster and more space-efficient algorithm for inferring arc-annotations of RNA sequences through alignment	Jansson, J. ; Ng, S.-K.; Sung, W.-K. ; Willy, H.
2006	A linear size index for approximate pattern matching	Chan, H.-L.; Lam, T.-W.; Sung, W.-K. ; Tam, S.-L.; Wong, S.-S.
2011	A linear size index for approximate pattern matching	Chan, H.-L.; Lam, T.-W.; Sung, W.-K. ; Tam, S.-L.; Wong, S.-S.
2004	A mutation-sensitive approach for locating conserved gene pairs between related species	Chan, H.L.; Lam, T.W.; Sung, W.K. ; Wong, P.W.H.; Yiu, S.M.
2010	A signal-noise model for significance analysis of ChIP-seq with negative control	Xu, H.; Handoko, L.; Wei, X.; Ye, C.; Sheng, J.; Wei, C.-L.; Lin, F.; Sung, W.-K.
2007	A space and time efficient algorithm for constructing compressed suffix arrays	Hon, W.-K.; Lam, T.-W.; Sadakane, K.; Sung, W.-K. ; Yiu, S.-M.
2005	Adaptive control of hybridization noise in dna sequencing-by-hybridization	Leong, H.-W. ; Preparata, F.P.; Sung, W.-K. ; Willy, H.
2010	Adjacent nucleotide dependence in ncRNA and order-1 SCFG for ncRNA identification	Wong, T.K.F.; Lam, T.-W.; Sung, W.-K. ; Yiu, S.-M.
2011	Algorithms for building consensus MUL-trees	Cui, Y. ; Jansson, J.; Sung, W.-K.
2005	Algorithms for combining rooted triplets into a galled phylogenetic network	Jansson, J. ; Nguyen, N.B.; Sung, W.-K.
2006	Algorithms for combining rooted triplets into a galled phylogenetic network	Jansson, J. ; Nguyen, N.B.; Sung, W.-K.
2013	Algorithms for the majority rule (+) consensus tree and the frequency difference consensus tree	Jansson, J.; Shen, C.; Sung, W.-K.
2005	Allowing mismatches in anchors forwhole genome alignment: Generation and effectiveness	Yiu, S.M.; Chan, P.Y.; Lam, T.W.; Sung, W.K. ; Ting, H.F.; Wong, P.W.H.
2007	An efficient strategy for extensive integration of diverse biological data for protein function prediction	Chua, H.N.; Sung, W.-K. ; Wong, L.
2007	An experimental study of compressed indexing and local alignments of DNA	Lam, T.-W.; Sung, W.-K. ; Tam, S.-L.; Wong, C.-K.; Yiu, S.-M.
2008	An HMM approach to genome-wide identification of differential histone modification sites from ChIP-seq data	Xu, H.; Wei, C.-L.; Lin, F.; Sung, W.-K.

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