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https://doi.org/10.1007/978-1-61779-621-0_13
| Title: | Genetic analysis | Authors: | Smith, G.J.D. Bahl, J. Vijaykrishna, D. |
Keywords: | Bayesian inference Evolution Maximum likelihood Natural selection Neighbor joining Phylogeny Sequence alignment |
Issue Date: | 2012 | Abstract: | Genetic analysis of sequence data is central to determining the evolutionary history and molecular epidemiology of viruses, particularly those such as influenza A virus that have complex ecosystems involving multiple hosts. Here we provide an outline of routine phylogenetic analyses of influenza A viruses including multiple sequence alignment, selecting the best-fit evolutionary model and phylogenetic tree reconstruction using Neighbor joining, Maximum likelihood, and Bayesian inference. © 2012 Springer Science+Business Media, LLC. | Source Title: | Methods in Molecular Biology | URI: | http://scholarbank.nus.edu.sg/handle/10635/126494 | ISBN: | 9781617796203 | ISSN: | 10643745 | DOI: | 10.1007/978-1-61779-621-0_13 |
| Appears in Collections: | Staff Publications |
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